Just a shot in the dark, but might this be a glitch while switching from
the initramfs to the real root filesystem?  I took a quick look at the
source of modprobe, and I can't immediately see any way that the message
might occur other than the file genuinely not being present.

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Maverick could not load /lib/modules/2.6.35-22-generic/modules.dep
https://bugs.launchpad.net/bugs/642421
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