I think that GC means graphic context. But I'm not sure.

If you could upload somewhere that file that's causing you troubles I can try 
to confirm the issue on my machine.
I have some highlighted PDFs with 500 pages or more and they work for me 
without issues. And I have some small xournal files with 4 to 7 annotated pages 
and they work ok too.

Thanks,
pura vida.

-- 
xorg 100% cpu while using xournal
https://bugs.launchpad.net/bugs/657783
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