It is true that still most programs store there data outside of the XDG hierarchy but this is changing, bugs have been filed against almost all GNOME packages and many have been fixed already (https://bugzilla.gnome.org/show_bug.cgi?id=523057), in addition to the applications you mentioned, other "standard" applications like Empathy, gnome-do, pitivi, tracker, vlc, etc. already use .local/share.
** Bug watch added: GNOME Bug Tracker #523057 https://bugzilla.gnome.org/show_bug.cgi?id=523057 -- Why are notes not located in .tomboy https://bugs.launchpad.net/bugs/662085 You received this bug notification because you are a member of Ubuntu Bugs, which is subscribed to Ubuntu. -- ubuntu-bugs mailing list ubuntu-bugs@lists.ubuntu.com https://lists.ubuntu.com/mailman/listinfo/ubuntu-bugs