Kalidarn, please help us delimit the problem. From your linked thread, I
see you have nVidia, it is a match with the problem related here. What
is your CPU? Is it by any chance a Core i7? Do you see the timer
interrupt freezing in /proc/interrupts during these events? (Use 'watch
-d grep timer /proc/interrupts' to see if the timer interrupt is
working)

Currently I'm using kernel 2.6.37-rc1 from
https://wiki.ubuntu.com/KernelMainlineBuilds and I'm yet to see the
problem happen again.

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Timer interrupt freezes, system becomes sluggish
https://bugs.launchpad.net/bugs/665796
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