I made 2 changes to my system, and the problem has disappeared. I'm not
sure which one it was, since I made them both at the same time. I
increased the amount of physical memory in my laptop from 4GB to 8GB.
Then, to try to solve a different issue I was having where the system
would randomly hang with a purple screen with vertical white lines, I
disabled a power saving AGP feature in the BIOS. I haven't had a system
hang or everything swap out to disk since, and this was about 2 weeks
ago.

It seems less likely that the fix was due to increasing the physical
memory. I would close out every application before suspending, and I
would still get the issue after 2-3 suspend/resume cycles. Before
suspending, free -m would show 2+GB of free physical memory, and some
other memory was just being used as cache, but there was never any swap
usage. So I'm leaning toward it being fixed by the BIOS change.

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https://bugs.launchpad.net/bugs/391628

Title:
  Everything gets swapped out after resume from suspend using fglrx drivers

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