This seems to have been fixed recently!
unity:
Installed: 3.6.4-0ubuntu1
Candidate: 3.6.8-0ubuntu1
Version table:
3.6.8-0ubuntu1 0
500 http://us.archive.ubuntu.com/ubuntu/ natty/main amd64 Packages
*** 3.6.4-0ubuntu1 0
100 /var/lib/dpkg/status
I no longer have this problem.
** Changed in: unity (Ubuntu)
Status: Triaged => Fix Released
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https://bugs.launchpad.net/bugs/696996
Title:
Unity is offset down by difference in resolutions when Nvidia twinview
is used
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