Just got this today as well:
Setting up software-center (3.1.26.1) ...
No protocol specified
/usr/lib/pymodules/python2.7/gtk-2.0/gtk/__init__.py:57: GtkWarning: could not 
open display
  warnings.warn(str(e), _gtk.Warning)
Updating software catalog...this may take a moment.
Software catalog update was successful.


** Description changed:

+ LATEST VERSION TESTED: 3.1.26.1
+ 
  Binary package hint: software-center
  
  I saw the following, when upgrading software-center while SSH'ed in
  remotely:
  
  Setting up software-center (3.0.5) ...
  X11 connection rejected because of wrong authentication.
  /usr/lib/pymodules/python2.6/gtk-2.0/gtk/__init__.py:57: GtkWarning: could 
not open display
-   warnings.warn(str(e), _gtk.Warning)
+   warnings.warn(str(e), _gtk.Warning)
  
  My DISPLAY variable is set, but XAUTHORITY is not (since the apt-get(8)
  invocation is running as root via sudo).
  
  The software-center upgrade script(s) should not be making any use of
  X11 whatsoever, whether DISPLAY is set or not.

** Changed in: software-center (Ubuntu)
   Importance: Undecided => Low

** Changed in: software-center (Ubuntu)
       Status: New => Triaged

** Tags added: maverick natty

** Summary changed:

- X11 authentication warnings on upgrade
+ software-center tries to open a GUI on version upgrade

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https://bugs.launchpad.net/bugs/665659

Title:
  software-center tries to open a GUI on version upgrade

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