Debian Squeeze now has this behaviour too.
What actually happens is that the lower bound of the extended container,
which is based on a cylinder boundary when created with eCOmStation's (OS/2) 
LVM disktool,
is moved upwards to a MiB boundary by the Debian Squeeze / Ubuntu 10.04+ 
installation process.

This causes the eComStation Logical Volume Management system to fail,
as it expects the extended container to start on a cylinder boundary.

It would be very neighbourly if the Linux people would respect eComStations 
disk-layout
and not touch the extended container.

Since the extended container can potentially contain other bootable operating 
systems,
this Linux installer behaviour could be considered quite anti-social, since it 
has no business
messing with the extended container.

There already exists a company that messes with parts of the disk it does not 
own for
more that decades.

Please don't duplicate this behaviour.

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https://bugs.launchpad.net/bugs/669459

Title:
  Ubuntu installation writes into foreign partitions and MBR without
  permission, damaging other operating systems on the disk

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