I found this to be helpful for finding the corrupted files.  They may
not be 0 length:

find . -type f -exec cat {} \; > /dev/null

and look for "Input/output error"

taken from:

https://bugs.launchpad.net/ubuntu/+source/ecryptfs-
utils/+bug/372014/comments/68

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https://bugs.launchpad.net/bugs/509180

Title:
  ecryptfs sometimes seems to add trailing garbage to encrypted files

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