We do wait to start the session until PAM authorizes us.  But it's true
that lightdm apparently likes to reach into the user's home directory
before PAM authorizes us.

I tested by forcing lightdm to treat "/tmp" as the user's home directory
and this problem went away.  So what I think is happening is that
lightdm opens a file in /home/user and that prevents the ecryptfs mount
from happening...

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https://bugs.launchpad.net/bugs/823775

Title:
  Cannot login: could not update ICEauthority file .ICEauthority

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