A workaround is:

With gnome-compiz-manager installed, open GL Desktop on System->Preferences.
Enable "Enable GL Desktop" and "Show Tray Icon".
This gives you no top bar.
Now close Gnome Compiz Preferences (GL Desktop window), point your mouse on 
Tray icon, Right click on it and select Preferences.
GL Desktop Window open again with top bar on all windows....

@Chris
With this workaround "decoration" is present.
But just opening Desktop Effects the problem come up and no "decoration" is 
listed in g-conf-editor.

If I launch desktop-effects from terminal I get this:

nvidia hardware not available
Avviso del window manager: Il valore «» nel database di configurazione non è 
valido per la scorciatoia «toggle_shaded»
gtk-window-decorator: Could not acquire decoration manager selection on screen 
0 display ":0.0"
/usr/bin/compiz.real: Failed to load slide: /usr/share/gdm/themes/Human/ubuntu
/usr/bin/compiz.real: Failed to load slide: 
/usr/share/gdm/themes/Human/ubuntu.png
inotify_add_watch: No such file or directory
/usr/bin/compiz.real: water: GL_ARB_fragment_program is missing
Avviso del window manager: Il valore «» nel database di configurazione non è 
valido per la scorciatoia «toggle_shaded»

-- 
desktop effects remove top bar on all my windows and make windows unmovable
https://bugs.launchpad.net/bugs/102368
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