Same for me. I upgrade the system (from the last upgrade I cannot enter
Gnome, it enter to Gnome classic)

and I get:

....
Setting up software-center (5.1.7) ...
Updating software catalog...this may take a moment.
WARNING:softwarecenter.db.update:The file: 
'/usr/share/app-install/desktop/deja-dup:deja-dup-ccpanel.desktop' could not be 
read correctly. The application associated with this file will not be included 
in the software catalog. Please consider raising a bug report for this issue 
with the maintainer of that application
WARNING:softwarecenter.db.update:The file: 
'/usr/share/app-install/desktop/rar.desktop' could not be read correctly. The 
application associated with this file will not be included in the software 
catalog. Please consider raising a bug report for this issue with the 
maintainer of that application
Software catalog update was successful.
....

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https://bugs.launchpad.net/bugs/921272

Title:
  Corrupt .desktop file

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