On every upgrade of the tzdata package, the current timezone setting is
read from /etc/timezone into the debconf database. I don't see any way
that this could be a debconf bug.
Africa/Bamako appears to be at the same offset as London. Is it
possible that you used a map picker when setting your timezone back to
GMT, and that the wrong city was selected for you by mistake?
** Changed in: tzdata (Ubuntu)
Status: New => Incomplete
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https://bugs.launchpad.net/bugs/948809
Title:
tzdata says "Current default time zone: 'Africa/Bamako' during package
install; previously was 'Europe/London' during OS install
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