Here is the log for the same failure in Unity 2D.

The only difference with Unity 2D was I could actually click on the launcher 
(far left thing) and start firefox.
But clicking within the window does not work (had to use tab to move to 
appropriate fields to file this bug).

** Attachment added: "xwininfo-3.2.0-19-generic-20124022-fail-2D"
   
https://bugs.launchpad.net/ubuntu/+source/unity/+bug/960532/+attachment/2916955/+files/xwininfo-3.2.0-19-generic-20124022-fail-2D

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https://bugs.launchpad.net/bugs/960532

Title:
  unity does not respond to clicking

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