Ok, I've found a solution for my problem. The cause was the 32 bit
version, so I installed the 64 bit jdk and changed the default location
for the jdk in netbeans to the new jdk.  There are also no more warnings
about the modules.

More details:
- download the desired jdk from [0]. 
- extract to the desired location ( for example in my case: 
/usr/local/jdk1.6.0_26 )
- set netbeans default location of JDK with --jdkhome /usr/local/jdk1.6.0_26 or 
manually modify the file indicated by  "locate netbeans.conf".

[0] http://www.oracle.com/technetwork/java/javase/downloads/index.html

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https://bugs.launchpad.net/bugs/936129

Title:
  Netbeans 7.01 not open after loading modules in ubuntu 12.04

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