Hello Knut,
I have tested it with Ubuntu 12.04. It works there.
Because of lacking information on which Ubuntu version the issue occurse
that you have reported I close this as fixed.
Thank you for reporting
** Changed in: autodocktools (Ubuntu)
Status: New => Fix Released
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https://bugs.launchpad.net/bugs/651832
Title:
Autodock is missing depency so it can not install all pacakge
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