Sorry for the delay - the info you requested is below.
I'm sure that the problem I had was because I installed from the package
but when I ran calibre it told me that it was out of date and asked me
to update. That update was presumably not managed by apt
steve@computer01:~$ apt-cache policy calibre calibre-bin
calibre:
Installed: (none)
Candidate: 0.8.38+dfsg-1
Version table:
0.8.38+dfsg-1 0
500 http://gb.archive.ubuntu.com/ubuntu/ precise/universe i386 Packages
100 /var/lib/dpkg/status
calibre-bin:
Installed: (none)
Candidate: 0.8.38+dfsg-1
Version table:
0.8.38+dfsg-1 0
500 http://gb.archive.ubuntu.com/ubuntu/ precise/universe i386 Packages
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https://bugs.launchpad.net/bugs/1022807
Title:
package calibre 0.8.38+dfsg-1 [modified: usr/bin/calibre usr/bin
/calibre-customize usr/bin/calibre-debug usr/bin/calibre-parallel
usr/bin/calibre-server usr/bin/calibre-smtp usr/bin/calibredb usr/bin
/ebook-convert usr/bin/ebook-device usr/bin/ebook-meta usr/bin/ebook-
viewer usr/bin/epub-fix usr/bin/fetch-ebook-metadata usr/bin/lrf2lrs
usr/bin/lrfviewer usr/bin/lrs2lrf usr/bin/markdown-calibre
usr/bin/pdfmanipulate usr/bin/web2disk] failed to install/upgrade:
unable to securely remove
'/usr/lib/calibre/calibre/utils/opensearch/query.py': Not a directory
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