Hi!
So it seems like this bug is a REALLY SIMPLE fix, and was fixed upstream.

BUT this bug is in the LTS (5-year) version of Ubuntu, which I think is
not ideal.

How do we solve this?

The bug exists for mafft and mafft-homologs and the only thing that
needs change is the prefix as shown below.

Thanks for listening,
Folmer


::::::::::::::
patch for mafft-homologs
::::::::::::::
--- /usr/bin/mafft-homologs
+++ /usr/bin/mafft-homologs
@@ -5,7 +5,7 @@
 # by locally installed blast. Leave this if you do 
 # not use the '-l' option.
 
-mafftpath = "/build/buildd/mafft-6.850/debian/mafft/usr/lib/mafft/bin/mafft"   
+mafftpath = "/usr/lib/mafft/bin/mafft"   
 # path of mafft. "/usr/local/bin/mafft"
 # if mafft is in your command path, "mafft" is ok.
 
::::::::::::::
patch for mafft
::::::::::::::
--- /usr/bin/mafft
+++ /usr/bin/mafft
@@ -23,7 +23,7 @@
 if [ "$MAFFT_BINARIES" ]; then
        prefix="$MAFFT_BINARIES"
 else
-       prefix=/build/buildd/mafft-6.850/debian/mafft/usr/lib/mafft/lib/mafft
+       prefix=/usr/lib/mafft/lib/mafft
 fi
 export prefix

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https://bugs.launchpad.net/bugs/1026608

Title:
  Package doesn't install correctly. See upstream debian install bug for
  details.

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