This bug was fixed in the package iptables-persistent - 0.5.6ubuntu1

---------------
iptables-persistent (0.5.6ubuntu1) quantal; urgency=low

  * Sync on Debian (Fixes LP: #1002078)
  * fix LP: #1019857 - flushing nat table fails; Apply patch given in the bug
    by Andreas Rütten, thanks! (Closes: #683789)

iptables-persistent (0.5.6) unstable; urgency=low

  * [6b6358] Instead of checking on modules, test a working iptables more
    directly (Closes: #679840)
  * [1db63c] Remove dependency on kmod
 -- Micah Gersten <[email protected]>   Thu, 23 Aug 2012 22:50:38 -0500

** Changed in: iptables-persistent (Ubuntu)
       Status: In Progress => Fix Released

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https://bugs.launchpad.net/bugs/1019857

Title:
  flushing nat table fails

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