You'll need to check if it works, of course, but my recommendation would
be to move the unsafe_swap script in partman-crypto from commit.d to
check.d.  That's where most checks of this kind belong, but the check.d
facility is newer than much of the rest of partman so it isn't used
quite everywhere it should be.

It's possible that you may have to rearrange unsafe_swap a little bit to
deal with checking the disk layout that's about to be committed rather
than whatever's currently on disk.  I haven't read through it in enough
detail to be sure about this.

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https://bugs.launchpad.net/bugs/1056707

Title:
  "Unsafe swap space detected" dialog displayed too late if swap is
  created after an encrypted partition and makes manual partitioner
  unusable

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