It looks like the fundamental problem is that gpg-agent is started with
X from Xsessions.d, but doesn't get registered (presumably
RegisterClient()), so when X exists it doesn't know to stop gpg-agent.
** Changed in: gnupg2 (Ubuntu)
Status: Confirmed => Triaged
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gpg-agent is not stopped on logout
https://bugs.launchpad.net/bugs/30717
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