Thanks for answer #23, it solved my problem.

The problem occured only by VLC itself and the KDE Phonon VLC module. So
I suspect that VLC is doing something a little bit different than most
other audio backends. Maybe the chunk size VLC uses or the timing of
VLC.

Also I followed
https://wiki.archlinux.org/index.php/PulseAudio#Choppy.2C_overdriven_sound
(set samplerate to 48000 Hz) and
https://wiki.archlinux.org/index.php/PulseAudio#Setting_the_default_fragment_number_and_buffer_size_in_Pulseaudio
(Set correct buffer and fragment size for 48000 Hz). This alone without
answer #23 was not enough, but I guess they are worthwhile anyway.

$ lspci | grep -i audio
00:14.2 Audio device: Advanced Micro Devices [AMD] nee ATI SBx00 Azalia (Intel 
HDA) (rev 40)
01:05.1 Audio device: Advanced Micro Devices [AMD] nee ATI RS880 HDMI Audio 
[Radeon HD 4200 Series]

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https://bugs.launchpad.net/bugs/751265

Title:
  pulseaudio distorts VLC audio

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