I just tried to build with pbuilder picard-tools (1.82) and it succeeded
with current libsnappy package in Debian:
...
dh_auto_configure
make[1]: Leaving directory `/tmp/buildd/picard-tools-1.82'
debian/rules override_dh_auto_build
make[1]: Entering directory `/tmp/buildd/picard-tools-1.82'
dh_auto_build -- -Dant.build.javac.source=1.5 -Dant.build.javac.target=1.5
Buildfile: /tmp/buildd/picard-tools-1.82/build.xml
[exec] Execute failed: java.io.IOException: Cannot run program
"svnversion": java.io.IOException: error=2, No such file or directory
init:
compile-sam-jdk:
[mkdir] Created dir: /tmp/buildd/picard-tools-1.82/classes
[javac] /tmp/buildd/picard-tools-1.82/build.xml:101: warning:
'includeantruntime' was not set, defaulting to build.sysclasspath=last; set to
false for repeatable builds
[javac] Compiling 112 source files to /tmp/buildd/picard-tools-1.82/classes
[javac] Note: Some input files use or override a deprecated API.
[javac] Note: Recompile with -Xlint:deprecation for details.
[javac] Note: Some input files use unchecked or unsafe operations.
[javac] Note: Recompile with -Xlint:unchecked for details.
sam-jar:
[mkdir] Created dir: /tmp/buildd/picard-tools-1.82/dist
[jar] Building jar: /tmp/buildd/picard-tools-1.82/dist/sam-1.82.jar
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https://bugs.launchpad.net/bugs/1078012
Title:
Sync picard-tools 1.79-1 (universe) from Debian unstable (main)
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