Workaround for others with similar problems is to append:
libata.force=80c
to GRUB_CMDLINE_LINUX_DEFAULT= between the double quotes. If there are other 
parameters, separate with a space
sudo update-grub
sudo reboot

This will not get you SATA speeds, but at least you get UDMA/133 (instead of 
UDMA/33), which is still a vast improvement.
This is confirmed from my dmesg:
[    1.088238] pata_acpi 0000:00:0f.0: PCI INT A -> GSI 21 (level, low) -> IRQ 
21
[    1.088295] pata_acpi 0000:00:0f.0: PCI INT A disabled
[    1.285099] pata_via 0000:00:0f.0: version 0.3.4
[    1.285118] pata_via 0000:00:0f.0: PCI INT A -> GSI 21 (level, low) -> IRQ 21
[    1.286650] scsi0 : pata_via
[    1.286819] scsi1 : pata_via
[    1.288565] ata1: PATA max UDMA/133 cmd 0xbc00 ctl 0xb880 bmdma 0xb400 irq 21
[    1.288575] ata2: DUMMY
[    1.460157] ata1: FORCE: cable set to 80c
[    1.460377] ata1.00: ATA-8: ST32000542AS, CC35, max UDMA/133
[    1.460392] ata1.00: 3907029168 sectors, multi 16: LBA48 NCQ (depth 0/32)
[    1.460411] ata1.01: ATAPI: PIONEER BD-RW   BDR-207D, 1.20, max UDMA/100
[    1.476340] ata1.00: configured for UDMA/133
[    1.492155] ata1.01: configured for UDMA/100

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https://bugs.launchpad.net/bugs/1087631

Title:
  SATA drive reduced to UDMA/33

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