Public bug reported:
Hi,
I spent an afternoon failing to create a PNG from a SMILES via
echo "cccccc" | babel -i smi -o png test.png
(Ubuntu 12.04, both with openbabel 2.3.0+dfsg-3ubuntu3)
but this did not create any PNGs and the following messages:
echo "cccccc" | babel -i smi -o png test.png
==============================
*** Open Babel Warning in PNG Format
Embedding in InChI format.
Use the -xO (uppercase O) option for a different format
==============================
*** Open Babel Warning in InChI code
#0 :Omitted undefined stereo
0 molecules converted
2 warnings 15 audit log messages
Upgrading to 2.3.1+dfsg-4 from Debian solved the problem:
echo "cccccc" | babel -i smi -o png test.png
1 molecule converted
38 audit log messages
Yours,
Steffen
** Affects: openbabel (Ubuntu)
Importance: Undecided
Status: New
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https://bugs.launchpad.net/bugs/1180452
Title:
PNG creation broken, fixed in Debian 2.3.1+dfsg-4
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