Thanks so much for posting the log file. From this I can see that indeed
the backend is not launching as it should:

2013-05-29 12:53:10,091 DEBUG    Sending message with sequence number 0 to 
backend
2013-05-29 12:54:10,152 DEBUG    Backend didn't respond, trying to create again.
2013-05-29 12:54:10,153 DEBUG    Sending message with sequence number 1 to 
backend
2013-05-29 12:55:10,214 DEBUG    Backend didn't respond, trying to create again.
2013-05-29 12:55:10,215 DEBUG    Sending message with sequence number 2 to 
backend

The failures to create the backend mean that it didn't start, this is
usually caused by the privileged runner (sudo, gksudo, etc) not
launching the backend, usually due to a bad password (but in your case
we know you're entering the correct password, so the problem lies
elsewhere).

OK so let's try replicating Checkbox's backend launch process. Could you
run these commands  on a terminal and let me know what happens? Also, if
any of these pop a graphical window, I'd really appreciate if you could
take a screenshot of some sort.

kdesudo ls
gksudo ls
sudo ls

My expectations are:
kdesudo ls - This should say that kdesudo is not installed (which is correct).
gksudo ls - On an stock Ubuntu system, this should say that gksudo is not 
installed. But in your case I suspect it will pop up a window asking for the 
password. Enter your user's password (not root's). I suspect it will say the 
password is incorrect and ask you again.
sudo ls - This should ask for the password on the console, and work correctly 
by showing a directory listing.


If this holds, it would mean that somehow gksudo got installed on your
system, and it's not correctly recognizing your password, possibly due
to the keyboard layout problem you mention. But let's cross that bridge
when we get to it.

Thanks for your help chasing this problem down, I know it's been a slow
process but we have some good clues now.

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https://bugs.launchpad.net/bugs/1184061

Title:
  checkbox does not accept my valid (for everything else) password

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