I tried kernel 3.9.11, problem still not solved:

usb 3-1: USB disconnect, device number 2
Jul 22 12:09:51 Arbeits-PC kernel: [  625.819601] hub 3-0:1.0: unable to 
enumerate USB device on port 1
Jul 22 12:09:51 Arbeits-PC kernel: [  626.115974] usb 3-1: new high-speed USB 
device number 5 using xhci_hcd
Jul 22 12:10:07 Arbeits-PC kernel: [  631.122487] xhci_hcd 0000:03:00.0: 
Timeout while waiting for address device command
Jul 22 12:10:07 Arbeits-PC kernel: [  640.313685] ------------[ cut here 
]------------
Jul 22 12:10:07 Arbeits-PC kernel: [  640.313693] WARNING: at 
/home/apw/COD/linux/kernel/watchdog.c:245 watchdog_overflow_callback+0x9a/0xc0()
Jul 22 12:10:07 Arbeits-PC kernel: [  640.313694] Hardware name: System Product 
Name
Jul 22 12:10:07 Arbeits-PC kernel: [  640.313695] Watchdog detected hard LOCKUP 
on cpu 3
Jul 22 12:10:07 Arbeits-PC kernel: [  640.313696] Modules linked in: 
hid_generic usbhid hid pci_stub vboxpci(OF) vboxnetadp(OF) vboxnetflt(OF) 
vboxdrv(OF) snd_hda_codec_hdmi intel_powerclamp coretemp kvm_intel 
snd_hda_codec_realtek kvm joydev xpad snd_hda_intel usb_storage ff_memless 
snd_hda_codec crc32_pclmul snd_hwdep ghash_clmulni_intel snd_pcm aesni_intel 
aes_x86_64 snd_page_alloc xts nvidia(POF) lrw parport_pc gf128mul snd_seq_midi 
ablk_helper eeepc_wmi snd_seq_midi_event cryptd asus_wmi ppdev snd_rawmidi 
rfcomm mxm_wmi bnep sparse_keymap bluetooth snd_seq snd_seq_device snd_timer 
microcode snd video nls_iso8859_1 psmouse wmi lpc_ich serio_raw mac_hid 
soundcore mei lp parport e1000e ptp ahci pps_core libahci
Jul 22 12:10:07 Arbeits-PC kernel: [  640.313731] Pid: 34, comm: khubd Tainted: 
PF          O 3.9.11-030911-generic #201307202035
Jul 22 12:10:07 Arbeits-PC kernel: [  640.313732] Call Trace:
Jul 22 12:10:07 Arbeits-PC kernel: [  640.313733]  <NMI>  [<ffffffff8105a76f>] 
warn_slowpath_common+0x7f/0xc0
Jul 22 12:10:07 Arbeits-PC kernel: [  640.313739]  [<ffffffff8105a866>] 
warn_slowpath_fmt+0x46/0x50
Jul 22 12:10:07 Arbeits-PC kernel: [  640.313741]  [<ffffffff810ee3aa>] 
watchdog_overflow_callback+0x9a/0xc0
Jul 22 12:10:07 Arbeits-PC kernel: [  640.313744]  [<ffffffff8112da8c>] 
__perf_event_overflow+0x9c/0x220
Jul 22 12:10:07 Arbeits-PC kernel: [  640.313747]  [<ffffffff81025938>] ? 
x86_perf_event_set_period+0xd8/0x150
Jul 22 12:10:07 Arbeits-PC kernel: [  640.313749]  [<ffffffff8112e2a4>] 
perf_event_overflow+0x14/0x20
Jul 22 12:10:07 Arbeits-PC kernel: [  640.313752]  [<ffffffff8102bbab>] 
intel_pmu_handle_irq+0x19b/0x250
Jul 22 12:10:07 Arbeits-PC kernel: [  640.313755]  [<ffffffff8170cc71>] 
perf_event_nmi_handler+0x21/0x30
Jul 22 12:10:07 Arbeits-PC kernel: [  640.313757]  [<ffffffff8170c379>] 
nmi_handle.isra.0+0x59/0x80
Jul 22 12:10:07 Arbeits-PC kernel: [  640.313758]  [<ffffffff8170c519>] 
default_do_nmi+0xe9/0x240
Jul 22 12:10:07 Arbeits-PC kernel: [  640.313760]  [<ffffffff8170c700>] 
do_nmi+0x90/0xd0
Jul 22 12:10:07 Arbeits-PC kernel: [  640.313762]  [<ffffffff8170b901>] 
end_repeat_nmi+0x1e/0x2e
Jul 22 12:10:07 Arbeits-PC kernel: [  640.313765]  [<ffffffff8153f682>] ? 
xhci_handshake+0x22/0x70
Jul 22 12:10:07 Arbeits-PC kernel: [  640.313767]  [<ffffffff8153f682>] ? 
xhci_handshake+0x22/0x70
Jul 22 12:10:07 Arbeits-PC kernel: [  640.313769]  [<ffffffff8153f682>] ? 
xhci_handshake+0x22/0x70
Jul 22 12:10:07 Arbeits-PC kernel: [  640.313770]  <<EOE>>  
[<ffffffff81547f68>] xhci_abort_cmd_ring+0x88/0xd0
Jul 22 12:10:07 Arbeits-PC kernel: [  640.313773]  [<ffffffff81549d30>] 
xhci_cancel_cmd+0xa0/0x160
Jul 22 12:10:07 Arbeits-PC kernel: [  640.313776]  [<ffffffff81543114>] 
xhci_address_device+0x2a4/0x2f0
Jul 22 12:10:07 Arbeits-PC kernel: [  640.313779]  [<ffffffff8151320f>] 
hub_set_address+0x4f/0xe0
Jul 22 12:10:07 Arbeits-PC kernel: [  640.313782]  [<ffffffff8151390f>] 
hub_port_init+0x17f/0x7b0
Jul 22 12:10:07 Arbeits-PC kernel: [  640.313785]  [<ffffffff8147d18e>] ? 
update_autosuspend+0x3e/0x80
Jul 22 12:10:07 Arbeits-PC kernel: [  640.313787]  [<ffffffff8147d2bf>] ? 
pm_runtime_set_autosuspend_delay+0x5f/0x80
Jul 22 12:10:07 Arbeits-PC kernel: [  640.313789]  [<ffffffff815165b8>] 
hub_port_connect_change+0x318/0x7d0
Jul 22 12:10:07 Arbeits-PC kernel: [  640.313791]  [<ffffffff8151cbd7>] ? 
usb_control_msg+0xf7/0x120
Jul 22 12:10:07 Arbeits-PC kernel: [  640.313793]  [<ffffffff81516ca4>] 
hub_events+0x234/0x610
Jul 22 12:10:07 Arbeits-PC kernel: [  640.313795]  [<ffffffff81045d89>] ? 
default_spin_lock_flags+0x9/0x10
Jul 22 12:10:07 Arbeits-PC kernel: [  640.313797]  [<ffffffff815170b5>] 
hub_thread+0x35/0x1a0
Jul 22 12:10:07 Arbeits-PC kernel: [  640.313800]  [<ffffffff81080e40>] ? 
add_wait_queue+0x60/0x60
Jul 22 12:10:07 Arbeits-PC kernel: [  640.313801]  [<ffffffff81517080>] ? 
hub_events+0x610/0x610
Jul 22 12:10:07 Arbeits-PC kernel: [  640.313804]  [<ffffffff81080270>] 
kthread+0xc0/0xd0
Jul 22 12:10:07 Arbeits-PC kernel: [  640.313806]  [<ffffffff810801b0>] ? 
flush_kthread_worker+0xb0/0xb0
Jul 22 12:10:07 Arbeits-PC kernel: [  640.313809]  [<ffffffff81713cec>] 
ret_from_fork+0x7c/0xb0
Jul 22 12:10:07 Arbeits-PC kernel: [  640.313811]  [<ffffffff810801b0>] ? 
flush_kthread_worker+0xb0/0xb0
Jul 22 12:10:07 Arbeits-PC kernel: [  640.313812] ---[ end trace 
39d8f3262b404245 ]---
Jul 22 12:10:07 Arbeits-PC kernel: [  642.148866] usb 3-1: Device not 
responding to set address.
Jul 22 12:10:07 Arbeits-PC kernel: [  642.353121] usb 3-1: device not accepting 
address 5, error -71
Jul 22 12:10:28 Arbeits-PC kernel: [  647.359651] xhci_hcd 0000:03:00.0: 
Timeout while waiting for a slot
Jul 22 12:10:28 Arbeits-PC kernel: [  663.268293] xhci_hcd 0000:03:00.0: 
Stopped the command ring failed, maybe the host is dead
Jul 22 12:10:28 Arbeits-PC kernel: [  663.268313] xhci_hcd 0000:03:00.0: Abort 
command ring failed
Jul 22 12:10:28 Arbeits-PC kernel: [  663.268546] xhci_hcd 0000:03:00.0: HC 
died; cleaning up
Jul 22 12:10:28 Arbeits-PC kernel: [  663.270540] hub 3-0:1.0: cannot reset 
port 1 (err = -19)
Jul 22 12:10:28 Arbeits-PC kernel: [  663.270546] hub 3-0:1.0: cannot disable 
port 1 (err = -19)
Jul 22 12:10:28 Arbeits-PC kernel: [  663.270562] BUG: unable to handle kernel 
NULL pointer dereference at 0000000000000040
Jul 22 12:10:28 Arbeits-PC kernel: [  663.270565] IP: [<ffffffff81543357>] 
xhci_free_dev+0x67/0x170
Jul 22 12:10:28 Arbeits-PC kernel: [  663.270571] PGD 0 
Jul 22 12:10:28 Arbeits-PC kernel: [  663.270573] Oops: 0002 [#1] SMP 
Jul 22 12:10:28 Arbeits-PC kernel: [  663.270575] Modules linked in: 
hid_generic usbhid hid pci_stub vboxpci(OF) vboxnetadp(OF) vboxnetflt(OF) 
vboxdrv(OF) snd_hda_codec_hdmi intel_powerclamp coretemp kvm_intel 
snd_hda_codec_realtek kvm joydev xpad snd_hda_intel usb_storage ff_memless 
snd_hda_codec crc32_pclmul snd_hwdep ghash_clmulni_intel snd_pcm aesni_intel 
aes_x86_64 snd_page_alloc xts nvidia(POF) lrw parport_pc gf128mul snd_seq_midi 
ablk_helper eeepc_wmi snd_seq_midi_event cryptd asus_wmi ppdev snd_rawmidi 
rfcomm mxm_wmi bnep sparse_keymap bluetooth snd_seq snd_seq_device snd_timer 
microcode snd video nls_iso8859_1 psmouse wmi lpc_ich serio_raw mac_hid 
soundcore mei lp parport e1000e ptp ahci pps_core libahci
Jul 22 12:10:28 Arbeits-PC kernel: [  663.270608] CPU 3 <4>[  663.270611] Pid: 
34, comm: khubd Tainted: PF       W  O 3.9.11-030911-generic #201307202035 
System manufacturer System Product Name/Maximus IV GENE-Z
Jul 22 12:10:28 Arbeits-PC kernel: [  663.270615] RIP: 
0010:[<ffffffff81543357>]  [<ffffffff81543357>] xhci_free_dev+0x67/0x170
Jul 22 12:10:28 Arbeits-PC kernel: [  663.270616] RSP: 0018:ffff880212cbdcc8  
EFLAGS: 00010202
Jul 22 12:10:28 Arbeits-PC kernel: [  663.270618] RAX: 0000000000000000 RBX: 
ffff8802132c8000 RCX: 0000000000000000
Jul 22 12:10:28 Arbeits-PC kernel: [  663.270619] RDX: 0000000000000000 RSI: 
ffff880210cb2800 RDI: ffff880212c01e00
Jul 22 12:10:28 Arbeits-PC kernel: [  663.270620] RBP: ffff880212cbdd08 R08: 
0000000000000001 R09: ffffffff8187fa4e
Jul 22 12:10:28 Arbeits-PC kernel: [  663.270621] R10: ffff880210cb2800 R11: 
0000000000000505 R12: ffff880210cb2800
Jul 22 12:10:28 Arbeits-PC kernel: [  663.270622] R13: ffff880212c01e00 R14: 
0000000000000000 R15: 0000000000000040
Jul 22 12:10:28 Arbeits-PC kernel: [  663.270623] FS:  0000000000000000(0000) 
GS:ffff88021ed80000(0000) knlGS:0000000000000000
Jul 22 12:10:28 Arbeits-PC kernel: [  663.270624] CS:  0010 DS: 0000 ES: 0000 
CR0: 0000000080050033
Jul 22 12:10:28 Arbeits-PC kernel: [  663.270625] CR2: 0000000000000040 CR3: 
00000001deb8e000 CR4: 00000000000407e0
Jul 22 12:10:28 Arbeits-PC kernel: [  663.270626] DR0: 0000000000000000 DR1: 
0000000000000000 DR2: 0000000000000000
Jul 22 12:10:28 Arbeits-PC kernel: [  663.270627] DR3: 0000000000000000 DR6: 
00000000ffff0ff0 DR7: 0000000000000400
Jul 22 12:10:28 Arbeits-PC kernel: [  663.270629] Process khubd (pid: 34, 
threadinfo ffff880212cbc000, task ffff8802133d2ea0)
Jul 22 12:10:28 Arbeits-PC kernel: [  663.270630] Stack:
Jul 22 12:10:28 Arbeits-PC kernel: [  663.270630]  ffff88020f999800 
0000000000000000 0000000000000001 ffff880210cb2800
Jul 22 12:10:28 Arbeits-PC kernel: [  663.270634]  ffff88020f999800 
ffff88020f96a800 0000000000000001 0000000000000001
Jul 22 12:10:28 Arbeits-PC kernel: [  663.270637]  ffff880212cbddc8 
ffffffff815164e0 ffff880143444460 0000000000000000
Jul 22 12:10:28 Arbeits-PC kernel: [  663.270640] Call Trace:
Jul 22 12:10:28 Arbeits-PC kernel: [  663.270644]  [<ffffffff815164e0>] 
hub_port_connect_change+0x240/0x7d0
Jul 22 12:10:28 Arbeits-PC kernel: [  663.270646]  [<ffffffff8151cbd7>] ? 
usb_control_msg+0xf7/0x120
Jul 22 12:10:28 Arbeits-PC kernel: [  663.270648]  [<ffffffff81516ca4>] 
hub_events+0x234/0x610
Jul 22 12:10:28 Arbeits-PC kernel: [  663.270652]  [<ffffffff81045d89>] ? 
default_spin_lock_flags+0x9/0x10
Jul 22 12:10:28 Arbeits-PC kernel: [  663.270654]  [<ffffffff815170b5>] 
hub_thread+0x35/0x1a0
Jul 22 12:10:28 Arbeits-PC kernel: [  663.270657]  [<ffffffff81080e40>] ? 
add_wait_queue+0x60/0x60
Jul 22 12:10:28 Arbeits-PC kernel: [  663.270659]  [<ffffffff81517080>] ? 
hub_events+0x610/0x610
Jul 22 12:10:28 Arbeits-PC kernel: [  663.270661]  [<ffffffff81080270>] 
kthread+0xc0/0xd0
Jul 22 12:10:28 Arbeits-PC kernel: [  663.270664]  [<ffffffff810801b0>] ? 
flush_kthread_worker+0xb0/0xb0
Jul 22 12:10:28 Arbeits-PC kernel: [  663.270668]  [<ffffffff81713cec>] 
ret_from_fork+0x7c/0xb0
Jul 22 12:10:28 Arbeits-PC kernel: [  663.270670]  [<ffffffff810801b0>] ? 
flush_kthread_worker+0xb0/0xb0
Jul 22 12:10:28 Arbeits-PC kernel: [  663.270671] Code: 0f 85 ee 00 00 00 49 63 
84 24 b0 04 00 00 45 31 f6 48 8b 84 c3 10 01 00 00 49 89 c7 48 89 45 c8 49 83 
c7 40 49 63 c6 48 8b 55 c8 <41> 83 27 fb 48 69 c0 e8 00 00 00 41 83 c6 01 49 81 
c7 e8 00 00 
Jul 22 12:10:28 Arbeits-PC kernel: [  663.270691] RIP  [<ffffffff81543357>] 
xhci_free_dev+0x67/0x170
Jul 22 12:10:28 Arbeits-PC kernel: [  663.270694]  RSP <ffff880212cbdcc8>
Jul 22 12:10:28 Arbeits-PC kernel: [  663.270694] CR2: 0000000000000040
Jul 22 12:10:28 Arbeits-PC kernel: [  663.270697] ---[ end trace 
39d8f3262b404246 ]---

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https://bugs.launchpad.net/bugs/1203453

Title:
  Nexus 4 causes system hang (xhci_hcd)

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