Root owning ~/.config is definitely the cause of the problem.

At some point in the startup process, a file is written to
/home/lubuntu/.config/ubuntu-system-settings/wizard-has-run

Apparently it is written by root, causing root to own the file.

** Attachment added: "output of ls -alR ~/.config"
   
https://bugs.launchpad.net/ubuntu/+source/lubuntu-software-center/+bug/1414366/+attachment/4305174/+files/ls-config.txt

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https://bugs.launchpad.net/bugs/1414366

Title:
  Lubuntu Software Center will not run on LiveCD. Root owns ~/.config so
  can't write ~/.config/lsc/LSC.ini

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