This is fixed in the package I just pushed to Debian unstable (1.4.2-1).

** Changed in: rkhunter (Ubuntu)
       Status: New => Fix Committed

** Changed in: rkhunter (Ubuntu)
     Assignee: (unassigned) => François Marier (fmarier)

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https://bugs.launchpad.net/bugs/973490

Title:
  Cron job uses hostname -f

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