It looks like you're having problems with your hardware; from
JournalErrors.txt:
Sep 14 08:23:15 hostname kernel: ata1.00: exception Emask 0x0 SAct 0x200000
SErr 0x0 action 0x0
Sep 14 08:23:15 hostname kernel: ata1.00: irq_stat 0x40000008
Sep 14 08:23:15 hostname kernel: ata1.00: failed command: READ FPDMA QUEUED
Sep 14 08:23:15 hostname kernel: ata1.00: cmd
60/20:a8:40:02:18/00:00:00:00:00/40 tag 21 ncq 16384 in
res
51/40:20:40:02:18/00:00:00:00:00/40 Emask 0x409 (media error) <F>
Sep 14 08:23:15 hostname kernel: ata1.00: status: { DRDY ERR }
Sep 14 08:23:15 hostname kernel: ata1.00: error: { UNC }
Sep 14 08:23:15 hostname kernel: Read(10): 28 00 00 18 02 40 00 00 20 00
Sep 14 08:23:15 hostname kernel: blk_update_request: I/O error, dev sda, sector
1573440
Sep 14 08:24:04 hostname kernel: ata1.00: exception Emask 0x0 SAct 0x800 SErr
0x0 action 0x0
Sep 14 08:24:04 hostname kernel: ata1.00: irq_stat 0x40000008
Sep 14 08:24:04 hostname kernel: ata1.00: failed command: READ FPDMA QUEUED
Sep 14 08:24:04 hostname kernel: ata1.00: cmd
60/08:58:48:18:c1/00:00:02:00:00/40 tag 11 ncq 4096 in
res
51/40:08:48:18:c1/00:00:02:00:00/40 Emask 0x409 (media error) <F>
Sep 14 08:24:04 hostname kernel: ata1.00: status: { DRDY ERR }
Sep 14 08:24:04 hostname kernel: ata1.00: error: { UNC }
Sep 14 08:24:04 hostname kernel: Read(10): 28 00 02 c1 18 48 00 00 08 00
Sep 14 08:24:04 hostname kernel: blk_update_request: I/O error, dev sda, sector
46209096
Sep 14 08:24:04 hostname kernel: EXT4-fs warning (device sda1):
__ext4_read_dirblock:1353: error -5 reading directory block (ino 1443295, block
5)
** Information type changed from Private Security to Public
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https://bugs.launchpad.net/bugs/1495528
Title:
package bsdutils 1:2.25.2-4ubuntu2 failed to install/upgrade: cannot
copy extracted data for './usr/bin/logger' to '/usr/bin/logger.dpkg-
new': unexpected end of file or stream
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