So now I think my problem is clearly the result of my Asus X99
motherboard.

I was researching the components of my new PC and discovered a lot of
anecdotal complaints about boot failure during Post that seemed related
to USB. I'm providing some of the links I discovered below in case
anyone other than the few here who have mentioned that they have an ASUS
motherboard.

Based on a comment on the last youtube video here, I disabled a lot of
functions in the BIOS that related to the handoff to the OS. I am now
able to boot and use my devices normally.

- https://www.youtube.com/watch?v=_av2DUQDE1A
- https://www.youtube.com/watch?v=cK23Jt6KJXs
- 
https://rog.asus.com/forum/showthread.php?78607-Asus-Confirmed-yesterday-that-X99-boards-has-boot-issues-with-Usb-Hubs-connected
- https://www.youtube.com/watch?v=A6SOdSeWSCM
- https://www.youtube.com/watch?v=2MDYUBp-1i4


- https://www.youtube.com/watch?v=A6SOdSeWSCM
* See comment from Alexandre Esquenet, how provides a solution here: 

http://users.skynet.be/xixou/x99_usb_boot_issue.png

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https://bugs.launchpad.net/bugs/1437492

Title:
  boot stalls on USB detection errors

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