Ok, after upgrading Ubuntu GNOME 16.04 Beta 1 with GNOME 3.18 to GNOME
3.19 I have found that the issue is still present in the latest version
of 3.19.

** Description changed:

  I first noticed this issue when I was running Ubuntu GNOME 15.04 with
  GNOME 3.16, but even now that I have upgraded to Ubuntu GNOME 15.10 with
- GNOME 3.18 I still experience the issue (I have also experienced the
- issue on Ubuntu GNOME 16.04 (Beta 1) but with 3.18, though I will test
- it with 3.19 and update the bug report soon). The issue being that for
- some reason suddenly for seemingly no reason unless I interact with the
- top bar in terms of clicking on an option on it (e.g.: the calender or
- Activities Overview buttons), I am unable to click on any application,
- or even drag some files on the desktop, though if I go to the bottom of
- my screen Docky does should which is on autohide so it does allow some
- interaction, though interestingly not all as buttons don't change colour
- that normally would when I go over them when my machine is doing this
- funny thing.
+ GNOME 3.18 I still experience the issue and I have noticed the presence
+ of the issue on Ubuntu GNOME 16.04 Beta 1 with GNOME 3.19 as well. The
+ issue being that for some reason suddenly for seemingly no reason unless
+ I interact with the top bar in terms of clicking on an option on it
+ (e.g.: the calender or Activities Overview buttons), I am unable to
+ click on any application, or even drag some files on the desktop, though
+ if I go to the bottom of my screen Docky does should which is on
+ autohide so it does allow some interaction, though interestingly not all
+ as buttons don't change colour that normally would when I go over them
+ when my machine is doing this funny thing.
  
  Some have even said though that they have to completely restart gnome-
  shell to temporarily get rid of the problem. I also experienced the
  problem a lot on 3.16, but in 3.18, it is periodic in the week that I
  experience it and it is several times, but not as much, and not as
  blocking.

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https://bugs.launchpad.net/bugs/1482397

Title:
  Applications suddenly don't allow any interaction with them

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