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I get the same warnings when running jing 20131210+dfsg+1-5 on Ubuntu Yakkety.
I did some research and found a Debian bug report which deals with the Java 
runtime warning ( 
That one seems to be a false positive because it first checks for Oracle java, 
then OpenJDK which could result in this warning. So the java runtime part 
should be covered. 

The upstream bug report doesn't mention the avalon/batik warnings
though, so that might be a separate issue. I'm not familiar with this
package though, so I don't really know which dependencies it needs. You
mentioned it worked, despite(?) the warnings, did it also work before
you installed avalon-framework and locate batik-all or did the whole or
parts of the program fail? Are there parts of the program which stops
working if you uninstall them again. In case they are needed, they
should probably be added as dependencies so that they are installed

** Bug watch added: Debian Bug tracker #834554

** Changed in: jing-trang (Ubuntu)
       Status: New => Confirmed

** Tags added: xenial yakkety

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  Jing dependencies (java runtime, batik, avalon-framework)

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