Hmm I knew I remembered something related ...
In bug 1694156 we have had a - what appears to me as - similar case.
There we could track it down to a config issue, but maybe you here are affected 
by the same issue yet without a simple config issue to fix.

The clue there was, that that dnsmasq was configured as global dns server to 
resolved in a manually added /etc/resolvconf/resolv.conf.d/tail. Due to that 
searches to the local search domain that failed started to be passed back and 
forth between dnsmasq and systemd-resolvd.
Does anybody affected here have the same setup of dnsmasq being registered as 
global dns? You can check with:
 $ systemd-resolve --status
The local dnsmasq should not more be listed in there.

Not sure - but if all affected users would have such a "local dnsmasq is
configured as global dns in systemd-resolved" then we will have to find
which package/config/guide/upgrade-path sets it up that way and resolve
that - but first of all please verify that this would help you.

Also as another option if you explicitly want your local dnsmasq to be
configured in resolved as global dns server - then you might want to
check if dnsmasq's option "--dns-loop-detect" via DNSMASQ_OPTS in
/etc/default/dnsmasq.

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https://bugs.launchpad.net/bugs/1670959

Title:
  systemd-resolved using 100% CPU

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