This also affects me (running ubuntu 16.04.2)
Remapping the shortcut for the command to some other combination does
not work either.
I had this bug for a long time, then deactivated the shortcut and
created my own shortcut to open a new terminal. That worked for a while
but did stop to work a few days ago.
Last kernel upgrade was 4.10.0-30-generic
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CTRL+ALT+T - shortcut to open Terminal is does not work
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