Blue, you have to distinguish between desktop disks and laptop disks.
That's a completely different world. I have read a quite nice article,
unfortunately only in czech http://www.root.cz/clanky/jak-na-uspavani-
disku-v-linuxu/.

It says, that desktop disks sustain about 40 000 spin ups. As opposed to
laptop disk, which sustain 300 000 spin ups (600 000 according to words
of some reports in here). As you can see, they are build with quite
another purpose in mind. They are supposed to spin down/park heads very
often, because it helps to survive all the shakes and movements you do
with your laptop. I don't know what "good" setting is, but author of the
article recommends 30sec delay to spin down as a good value. Further he
counts that with hdd spinning up again every 10minutes it can live for 6
years for 24/7. Which is completely acceptable.

What I am trying to say is, that I don't think hardware manufacturers
are completely dumb and don't understand their job. They just chose to
prefer disk safety to some of it's lifespan. The laptop mode setting
might be a little harsh, I am not expert, but I don't consider them
insane, when I see manufacturers defaults to be quite similar.

So the problem is elsewhere than you think: Ubuntu either shouldn't
allow laptop disks to go to sleep (bad option) or shouldn't wake them up
immediately (good option, that's what I am trying to say). The second
option is the Windows behaviour on two laptops I have tested.

-- 
default value in power.sh potentially kills laptop disks
https://bugs.launchpad.net/bugs/59695
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Bugs, which is the bug contact for Ubuntu.

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