You can disable wakeup by modifying "/proc/acpi/wakeup" in Linux

1. get all wakeup sources - "cat /proc/acpi/wakeup"

The results are something like

Device  S-state   Status   Sysfs node
PEG0      S4    *enabled   pci:0000:00:01.0
PEGP      S4    *disabled  pci:0000:01:00.0
PEG1      S4    *disabled
PEGP      S4    *disabled
XHC       S3    *enabled   pci:0000:00:14.0

2. find out which USB maps to your logitech mouse. You probably need
trial and error couple times. The above example is XHC which is USB3
controller which is capable of waking up from S3, S2 and S1. Your will

3. disable it by "echo XHC | sudo tee /proc/acpi/wakeup" (assuming XHC
is the one).

finally, you can disable it automatically by rc.local (like

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  External mouse movement wakes computer from hibernate

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