Further update,

According to the engineer at SMC, they did try "18.04.3" (not sure if
that means 4.15, or 5.3, hopefully not 5.2) and all four ports did work
for them, so this appears to be a regression in the i40e driver.

I've asked him to provide more info about what kernels they have tried
specifically to help narrow down where it breaks.

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https://bugs.launchpad.net/bugs/1887703

Title:
  5.4 is not identifying all ports on Intel x710-TM4 10GbE controller

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