Here is apport stuff, and there are more news.

I confirmed that the problem was in the gcrypt. More precisely,
disabling SSSE3 fixes this issue (echo intel-ssse3 >
/etc/gcrypt/hwf.deny).

The Virtualbox (running on Windows 10) was using software virtualization
("execution engine: native API") instead of VT-x - this might be the
root cause (i.e. bug is in Virtualbox), but I'm helping a friend and
don't have direct access to that PC, so can't test what's blocking VT-x.
Hyper-V and WSL are disabled in Windows features, the person hasn't
checked whether VT-x is enabled in BIOS yet.

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https://bugs.launchpad.net/bugs/1890006

Title:
  Hash mismatch on "apt update"

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