------- Comment From [email protected] 2022-05-06 06:22 EDT------- Here are the originally reported failures:
> But I found in "bedtools": > bedtools: bgzf.c:351: bgzf_hopen: Assertion > `compressBound(BGZF_BLOCK_SIZE) < BGZF_MAX_BLOCK_SIZE' failed. test- > intersect.sh: line 201: 1981 Aborted (core dumped) > $htsutil samtobam one_block.sam one_block.bam > > or in libbio: > perl: bgzf.c:142: bgzf_open: Assertion > `compressBound(BGZF_BLOCK_SIZE) < BGZF_MAX_BLOCK_SIZE' failed.Failed > 268/268 subtests I just double-checked, and apparently bedtools bundles htslib (under src/utils/htslib). I didn't check libbio, but most likely it does this as well. So the patch must be cherry-picked into all of the bundled copies. -- You received this bug notification because you are a member of Ubuntu Bugs, which is subscribed to Ubuntu. https://bugs.launchpad.net/bugs/1961427 Title: zlib: compressBound() returns an incorrect result on z15 To manage notifications about this bug go to: https://bugs.launchpad.net/ubuntu-z-systems/+bug/1961427/+subscriptions -- ubuntu-bugs mailing list [email protected] https://lists.ubuntu.com/mailman/listinfo/ubuntu-bugs
