Yes, it happens with applications associated to extensions (file types)
too, see comment # 12 in this bug report.
Yes this is with a clean Hardy install. It happened since day 1 of the
install, and it is still happening today after 200 official updates
(July/08).
Doing Help > About in Nautilus shows 2.22.3.
** Changed in: nautilus (Ubuntu)
Status: Incomplete => Confirmed
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Hardy - After rIght click on folders and opening with application, the selected
app is not remembered
https://bugs.launchpad.net/bugs/204826
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