Does this happen only in gnome? Try installing another window manager
like xfwm4 (from xfce), fluxbox, openbox, or others and see if it still
happens.
If it only happens in gnome, then maybe it is a metacity bug.
** Changed in: ubuntu
Status: New => Confirmed
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many apps randomly lose focus
https://bugs.launchpad.net/bugs/227214
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