Disabling "Unredirect Fullscreen Windows" in "General Options --> Genaral" 
sorts this out for me.
=> Works for me too.

Nevertheless I didn't get the trouble when running Wine apps under
compiz (Half-Life 2 DeathMatch and others) : it happens only with native
games (World of Padman etc).

-- 
Compiz causes OpenGL fullscreen games to eventually go windowed.
https://bugs.launchpad.net/bugs/157759
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