Just my two kopecks here:

It's not just the catalogue of specific PPAs that is a problem. Granted, 
that's one of the problems too, in my eyes; having it in the Ubuntu 
archive makes us look like we support that kind of unofficial 
bleeding-edge updates *and* the PPAs featured. Ubuntu does provide a way 
to install PPAs: through the Software Sources tool. But it does not 
treat some PPAs as "more equal than others".

The entire package management part just bugs me. It's basically a 
duplication of standard Ubuntu tools, and I doubt it has received such 
extensive testing as Software Sources/Update Manager/Software 
Center/Synaptic. The ability to manually edit sources.list files should 
not be exposed to the end user in the UI at all, that's for advanced 
users. Keep in mind that package management is a sensitive part of the 
system and reckless meddling can leave it in an inconsistent state.

If only package management was limited to its own section. But it also 
creeps into other sections; the Compiz settings, for example, include a 
checkbox (?!) for installing simple-ccsm, and even the application 
itself prompts to install its own PPA for updates.

The other sections basically expose "hidden" settings in gconf, but they 
do so in an inconsistent way. Some settings are innocent, others expose 
experimental and unreliable features (Metacity compositing, for 
instance), or are potentially dangerous and can render the desktop 
unusable. Again, this makes Ubuntu look like it promotes this.

Ultimately, the #1 bug in Ubuntu Tweak (which is really a bug in Ubuntu) 
is that some users feel it has the need to exist. I myself believe that 
many of the "hidden" gconf settings should be configurable, but that 
Ubuntu Tweak is the Wrong Way to Do It. If they're useful, they should 
either be added to the configuration dialogs of the respective 
applications, or have separate configuration dialogs (for example, ccsm 
and simple-ccsm do everything Ubuntu Tweak does for Compiz, and then 
some). That would remove the need for the safe subset of Ubuntu Tweak in 
the first place, just as the PPA culture and restricted extras packages 
proved to be the Right Way to Do It that removed the raison d'etre for 
its spiritual predecessor, Automatix.

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