This bug was fixed in the package mysql-dfsg-5.0 -
5.1.30really5.0.75-0ubuntu10

---------------
mysql-dfsg-5.0 (5.1.30really5.0.75-0ubuntu10) jaunty; urgency=low

  * debian/mysql-server-5.0.postinst: Clear out the second password
    when setting up mysql. (LP: #344816)

 -- Chuck Short <[email protected]>   Mon, 30 Mar 2009 14:59:35 -0400

** Changed in: mysql-dfsg-5.0 (Ubuntu)
       Status: Confirmed => Fix Released

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mysql-server-5.0: Leaves password in debconf database
https://bugs.launchpad.net/bugs/344816
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