It looks like this could be https://pagure.io/SSSD/sssd/issue/2977

Can you try adding this line to the [domain/] section of xenial's 
/etc/sssd/sssd.conf:
ldap_user_certificate = noSuchAttribute

and then restart sssd:
sudo service sssd restart


It worked around the problem here. Next I'm going to try the commit linked to 
the bug above.

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https://bugs.launchpad.net/bugs/1775636

Title:
  sss_ssh_authorizedkeys fails with: Error looking up public keys when
  client cert present in IPA

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