Well, problem solved.
The problem was I moved the database files and MySQL doesn't like that
(excerpt from /var/log/daemon.log):
Feb 11 12:24:40 spawn mysqld: InnoDB: Error: log file ./ib_logfile0 is of
different size 0 5242880 bytes
Feb 11 12:24:40 spawn mysqld: InnoDB: than specified in the .cnf file 0
268435456 bytes!
Feb 11 12:24:40 spawn mysqld: 100211 12:24:40 [ERROR] Plugin 'InnoDB' init
function returned error.
Feb 11 12:24:40 spawn mysqld: 100211 12:24:40 [ERROR] Plugin 'InnoDB'
registration as a STORAGE ENGINE failed.
After some postwork I have my InnoDB support back.
** Changed in: mysql-dfsg-5.1 (Ubuntu)
Status: New => Invalid
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mysql-server-5.1 does not include the InnoDB engine
https://bugs.launchpad.net/bugs/488373
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