Don't know if this would be of any help. I copied it from the error.log
-/var/log/mysql/error.log:

100815 19:28:45  InnoDB: Started; log sequence number 1 637983031
InnoDB: Starting in background the rollback of uncommitted transactions
InnoDB: Cleaning up trx with id 0 1738733
100815 19:28:45  InnoDB: Rollback of non-prepared transactions completed
100815 19:28:45 [Note] Event Scheduler: Loaded 0 events
100815 19:28:45 [Note] /usr/sbin/mysqld: ready for connections.
Version: '5.1.41-3ubuntu12.6'  socket: '/var/run/mysqld/mysqld.sock'  port: 
3306  (Ubuntu)
100815 19:28:46  InnoDB: Assertion failure in thread 2905140080 in file 
../../../storage/innobase/fsp/fsp0fsp.c line 3314
InnoDB: We intentionally generate a memory trap.
InnoDB: Submit a detailed bug report to http://bugs.mysql.com.
InnoDB: If you get repeated assertion failures or crashes, even
InnoDB: immediately after the mysqld startup, there may be
InnoDB: corruption in the InnoDB tablespace. Please refer to
InnoDB: http://dev.mysql.com/doc/refman/5.1/en/forcing-recovery.html
InnoDB: about forcing recovery.
100815 19:28:46 - mysqld got signal 6 ;
This could be because you hit a bug. It is also possible that this binary
or one of the libraries it was linked against is corrupt, improperly built,
or misconfigured. This error can also be caused by malfunctioning hardware.
We will try our best to scrape up some info that will hopefully help diagnose
the problem, but since we have already crashed, something is definitely wrong
and this may fail.

key_buffer_size=16777216
read_buffer_size=131072
max_used_connections=0
max_threads=151
threads_connected=0
It is possible that mysqld could use up to 
key_buffer_size + (read_buffer_size + sort_buffer_size)*max_threads = 345919 K
bytes of memory
Hope that's ok; if not, decrease some variables in the equation.

thd: 0x0
Attempting backtrace. You can use the following information to find out
where mysqld died. If you see no messages after this, something went
terribly wrong...
stack_bottom = (nil) thread_stack 0x30000
/usr/sbin/mysqld(my_print_stacktrace+0x2d) [0x7635ad]
/usr/sbin/mysqld(handle_segfault+0x494) [0x42f3d4]
[0x12d400]
/lib/tls/i686/cmov/libc.so.6(abort+0x182) [0xb27a82]
/usr/sbin/mysqld(fseg_free_step_not_header+0x243) [0x6527c3]
/usr/sbin/mysqld(+0x4f8b20) [0x6c0b20]
/usr/sbin/mysqld(+0x4f9003) [0x6c1003]
/usr/sbin/mysqld(trx_purge_fetch_next_rec+0x28c) [0x6c134c]
/usr/sbin/mysqld(row_purge_step+0x42) [0x6a1252]
/usr/sbin/mysqld(que_run_threads+0x5b0) [0x68caf0]
/usr/sbin/mysqld(trx_purge+0x375) [0x6bf0a5]
/usr/sbin/mysqld(srv_master_thread+0xf80) [0x6b5c90]
/lib/tls/i686/cmov/libpthread.so.0(+0x596e) [0xf7b96e]
/lib/tls/i686/cmov/libc.so.6(clone+0x5e) [0xbc7a4e]
The manual page at http://dev.mysql.com/doc/mysql/en/crashing.html contains
information that should help you find out what is causing the crash.

This sequence of error is repeated about every two minutes.

-- 
package mysql-server-5.1 5.1.41-3ubuntu12.3 failed to install/upgrade: 
subprocess new pre-installation script returned error exit status 1
https://bugs.launchpad.net/bugs/617678
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