libcap2 builds a binary at build time which is run to extract the list of 
capabilities and generate an header used for the rest of the build.
I assume that's what's causing the problem here as you'll essentially be 
getting the list of capabilities that are supported by the kernel on the build 
machine rather than the capabilities supported by the kernel on the user 
machine...

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https://bugs.launchpad.net/bugs/1084000

Title:
  libcap2: List of capabilities not in sync with the linux kernel

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