I have the same problem, but I have only one soundcard: Soundblaster
Audigy ZS 2.

When I start qjackctl (without starting jackd yet!) there is no more
sound from applications like totem or system sounds. Totem just stops at
the current position.

When I left-click the speaker Icon in the upper right corner and go to
settings, hardware, I can select a Profile. When I switch that profile
from "Analog Stereo Output" to "IEC958" or the other way, sound works
again. It does not matter what is selected before starting qjackctl, I
simply have to change the setting.

When I start qjackctl and then jackd and initiate suspend to ram (S3),
jackd ist stopped after resuming from standby. qjackctl still runs. I
start jackd and both audio from jackd and pulseadio is working fine.

I see the problem somewhere in qjackctl. At startup it does something to
pulseaudio or the soudcard, even without starting jackd. Maybe it scans
for available outputs/inputs then... ?

-- 
pulse audio stop when qjackctl is launched
https://bugs.launchpad.net/bugs/231601
You received this bug notification because you are a member of Ubuntu
Studio, which is a bug assignee.

Status in “pulseaudio” package in Ubuntu: Confirmed

Bug description:
So, 

I own 2 sound cards, the fisrt is an hda-nvidia integrated to the mother board. 
And for audio working purpose, I use on my worksation a RME hdsp multiface II 
sound card with its pci adapter. I edited the /etc/modprobe.d/alsa-base file to 
set the integrated chipset as default, index=0, and the second as index=1.

The problem I have is that when I launch Qjackctl, even without starting jack, 
Pulse Audio stop to send to sound to my mother board sound card. Very annoying 
problem. Is there a way that Pulse Audio always use the same sound card and 
never stop ?

Toine

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